Data Organisation

The data organization step manages the aspect of the adoption of field observation data, lab data, analyzed data and metadata into a central system. It prevents data loss, assesses the quality and harmonization of the data and preparation of the data for reuse. Data organization follows the soil archiving step in the development of the SIS and when the smaller definition of a SIS as a digital infrastructure for soil data is used, can be the first step after the user needs assessment.

Digital soil data, other than reports, maps, and documents, are stored in two main digital representations : attribute tables and raster formats.

The attribute table, if it includes a geometry, also referred to as vector data, typically contains the results of a soil data collection campaign or subsequent lab analysis. Raster format is a result of earth observation (aerial imagery) or a modelling effort. For every pixel on a grid, a numeric value(s) for the given variable is observed or predicted. The tools and procedures to work with these two types of data are quite distinct.

Raster data are often stored as flat files, two common formats being Geo Tagged Image File Format (GeoTIFF) and Network Common Data Form (NetCDF). These files are organized into catalogues (a folder structure). Rasters can also be stored in a database. This scenario is relevant if you use the raster analyses functions of the database to filter on or calculate cell values. Raster files can result in large files if they extend to a large area or are detailed. Large files led to long loading times. Various scenarios are common to optimize performance. Most common is adoption of an image pyramid, in which the data is subsampled at various resolutions. The client then reads data from the most relevant resolution only. Attribute table data can be stored as spreadsheets, or in databases. Storing in databases has two main advantages. 1) Data are accessible for reading and writing by multiple users, and 2) the integrity and security of the data are better maintained:

  • Integrity: databases provide options to set rules to maintain integrity. For example, a parent record cannot be removed if there is a related child record.
  • Security: databases enable fine-grained configuration of access on table level, for Read, Update and Delete privileges.

In either format, metadata of data is typically registered as a file close to or embedded in the data file, or in a registry, catalogue and/or Document Management System.

This workflow step introduces various standards and tools available to facilitate data organization.

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